Preparing figures and methods for a manuscript or reviewer response

Trace each figure

Connect every panel to a source table and the analysis that generated it. Record units, transformations, exclusions, sample counts and how uncertainty is displayed. Preserve original outputs separately.

Clarify the question

Identify whether a panel shows an exploratory pattern, an effect estimate or a formal comparison. For differential expression figures, retain the model design, contrast and multiple-testing decisions in methods notes.

Prepare readable exports

Agree target dimensions, readable labels, accessible color choices and vector or resolution requirements. Provide plotting source when included in scope so small editorial changes do not require recreating the analysis.

Respond to reviewers with provenance

List each requested analysis, the files and code affected, and what changed in the text or figure. Distinguish additional analyses from presentation edits. Do not alter underlying values to fit an expected story.

Limitations

Figure preparation cannot repair an unsupported design or validate biological conclusions. Additional tests may need new assumptions or a revised scope. Authorship, approval and submission remain matters for the research team.

Reference and next step

Editorial planning guide prepared by ANGSUMI; this is not a report of original research or a claim of independent scientific review.

Read the underlying method documentation or research guidance

Review the related service